This is the command fastaq-to_random_subset that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
fastaq_to_random_subset - Make a random sample of sequences (and optionally mates as well)
DESCRIPTION
usage: fastaq_to_random_subset [options] <infile> <outfile> <percent>
Takes a random subset of reads from a sequence file and optionally the corresponding read
from a mates file. Ouptut is interleaved if mates file given
positional arguments:
infile Name of input file
outfile
Name of output file
INT Per cent probability of keeping any given read (pair) in [0,100]
optional arguments:
-h, --help
show this help message and exit
--mate_file MATE_FILE
Name of mates file
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