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fastq_to_fasta - Online in the Cloud

Run fastq_to_fasta in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command fastq_to_fasta that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


fastq_to_fasta - Convert FASTQ files to FASTA files

DESCRIPTION


usage: fastq_to_fasta [-h] [-r] [-n] [-v] [-z] [-i INFILE] [-o OUTFILE] Part of FASTX
Toolkit 0.0.14 by A. Gordon (assafgordon@gmail.com)

[-h] = This helpful help screen.

[-r] = Rename sequence identifiers to numbers.

[-n] = keep sequences with unknown (N) nucleotides.

Default is to discard such sequences.

[-v] = Verbose - report number of sequences.

If [-o] is specified,
report will be printed to STDOUT.

If [-o] is not specified (and output goes to STDOUT), report will be printed to
STDERR.

[-z] = Compress output with GZIP.

[-i INFILE]
= FASTA/Q input file. default is STDIN.

[-o OUTFILE] = FASTA output file. default is STDOUT.

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