This is the command gmt-music-bmrp that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
gmt music bmr - Calculate gene coverages and background mutation rates.
VERSION
This document describes gmt music bmr version 0.04 (2016-01-01 at 23:10:19)
SYNOPSIS
gmt music bmr ...
DESCRIPTION
These tools are part of the MuSiC suite.
SUB-COMMANDS
GENERAL
calc-bmr
Calculates mutation rates given per-gene coverage (from "music bmr calc-covg"), and a
mutation list
calc-covg
Uses calcRoiCovg.c to count covered bases per-gene for each given tumor-normal pair of
BAMs.
calc-covg-helper
Uses calcRoiCovg.c to count covered bases per-gene for a tumor-normal pair of BAMs.
calc-wig-covg
Count covered bases per-gene for each given wiggle track format file.
Use gmt-music-bmrp online using onworks.net services
