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gt-encseq-info - Online in the Cloud

Run gt-encseq-info in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command gt-encseq-info that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


gt-encseq-info - Display meta-information about an encoded sequence.

SYNOPSIS


gt encseq info [option ...] indexname

DESCRIPTION


-nomap [yes|no]
do not map encoded sequence (gives less information) (default: no)

-mirrored [yes|no]
use mirrored encoded sequence (DNA only) (default: no)

-noindexname [yes|no]
do not output index name (default: no)

-show_alphabet [yes|no]
output alphabet definition (default: no)

-n50 [yes|no]
show N50 values (minimum length of largest sequences for covering at least 50% of
total sequence length) (default: no)

-o [filename]
redirect output to specified file (default: undefined)

-gzip [yes|no]
write gzip compressed output file (default: no)

-bzip2 [yes|no]
write bzip2 compressed output file (default: no)

-force [yes|no]
force writing to output file (default: no)

-help
display help and exit

-version
display version information and exit

REPORTING BUGS


Report bugs to <[email protected]>.

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