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imagej - Online in the Cloud

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This is the command imagej that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator



imagej - A Java image processing program inspired by NIH Image.


imagej [option] <filename>
imagej [-i image] [-b|-m] [arg1 ... argN]


Imagej is a Java-based image processing program developed at the National Institutes of
Health. ImageJ was designed with an open architecture that provides extensibility via Java
plugins and recordable macros. Custom acquisition, analysis and processing plugins can be
developed using ImageJ's built-in editor and a Java compiler. User-written plugins make
it possible to solve many image processing and analysis problems, from 3-dimensional
live-cell imaging,
to radiological image processing, multiple imaging system data comparisons to automated
hematology systems. ImageJ's plugin architecture and built in development environment has
made it a popular platform for teaching image processing.

ImageJ can be run as an online applet, a downloadable application, or on any computer with
a Java 1.1 or later virtual machine.


-h Output help information and exit.

-o Open images in existing ImageJ panel if one exists.

-p <N> Open images in existing ImageJ panel number <N>.

-x <MB>
Set available memory.

-c Enable plugin compilation within imagej.

-v Be verbose (vv or vvv increases verbosity).

-e Macro Code
Execute macro code.

-r Menu Command
Run menu command. Quotation marks are required around commands including spaces
Commands can be sent to open ImageJ panels with the -p option.

-b macro
Run macro without graphics window.

-m macro
Run macro, image will be opened before macro is run all following arguments are
passed to macro.

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