EnglishFrenchSpanish

Ad


OnWorks favicon

kmc_tools-sort - Online in the Cloud

Run kmc_tools-sort in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command kmc_tools-sort that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


kmc_tools-sort - sort KMC databases

SYNOPSIS


kmc_tools sort <inputdb> [input_params] <output> [output_params]

DESCRIPTION


Converts database produced by KMC2.x to KMC1.x database format (which contains k-mers in
sorted order)

OPTIONS


For each input there are additional parameters:

-ci<value>
exclude k-mers occurring less than <value> times

-cx<value>
exclude k-mers occurring more of than <value> times

For output there are additional parameters:

-cs<value>
maximal value of a counter

EXAMPLE


kmc_tools sort wy_kmc2 -ci3 -cx1000 wy_kmc1 -cs255

Use kmc_tools-sort online using onworks.net services


Free Servers & Workstations

Download Windows & Linux apps

Linux commands

Ad