This is the command mapMers that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
mapMers - report statistics of mapping kmers to sequences
SYNOPSIS
mapMers {-stats|-regions|-details} -m mersize -mers mers -seq fasta
OPTIONS
-stats reports the mean, minimum, and maximum for each sequence, along with a log2
histogram of the counts
-regions
reports regions with kmer coverage
-details
reports the forward and reverse count in the database for each kmer in the sequence
-m mersize
-mers mers
the meryl(1) database
-seq fasta
input sequence file
Use mapMers online using onworks.net services
