This is the command ontogete that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
ontoget - Get ontology term(s)
SYNOPSIS
ontoget -oboterms obo [-subclasses boolean] [-obsolete boolean] -outfile outobo
ontoget -help
DESCRIPTION
ontoget is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Ontology,Data retrieval:Ontology data" command
group(s).
OPTIONS
Input section
-oboterms obo
Additional section
-subclasses boolean
Extend the query matches to include all terms which are specialisations (sub-classes)
of the matched terms. Default value: N
-obsolete boolean
The default behaviour is to not use or return obsolete terms. This option if set will
include all terms. Default value: N
Advanced section
Output section
-outfile outobo
Use ontogete online using onworks.net services
