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primer_designerp - Online in the Cloud

Run primer_designerp in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command primer_designerp that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


primer_designer.pl -- command-line interface Bio::PrimerDesigner

SYNOPSIS


./primer_designer.pl [options] [dna_sequence or file]

Options:

-p|--program Program (default "primer3")
-n|--number Number of primer sets to return (default "5")
-b|--binary Path to binary executable (default "/usr/local/bin")
-m|--method "local" or "remote" (default "local")
-u|--url URL of remote primer3/e-PCR system (default
"aceserver.biotech.ubc.ca/cgi-bin/primer_designer.cgi")
--list-aliases Print alias list to primer3 input options and exit
--list-params Print a list of primer3/e-PCR input options and exit
-h|--help Print help and exit

DESCRIPTION


This script tests/demonstrates the Bio::PrimerDesigner interface to primer3 and e-PCR. It
can be used with a local installation of the unix binaries or remotely via an HTTP/CGI
request.

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