This is the command sycoe that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
syco - Draw synonymous codon usage statistic plot for a nucleotide sequence
SYNOPSIS
syco -sequence sequence -cfile codon -window integer -uncommon boolean -minimum float
-plot toggle -graph xygraph -outfile outfile
syco -help
DESCRIPTION
syco is a command line program from EMBOSS (“the European Molecular Biology Open Software
Suite”). It is part of the "Nucleic:Codon usage,Nucleic:Gene finding" command group(s).
OPTIONS
Input section
-sequence sequence
-cfile codon
Codon usage file
Advanced section
-window integer
Default value: 30
-uncommon boolean
Default value: N
-minimum float
Default value: .15
Output section
-plot toggle
Default value: Y
-graph xygraph
-outfile outfile
Use sycoe online using onworks.net services
