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frestmle - Online in the Cloud

Run frestmle in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command frestmle that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


frestml - Restriction site maximum Likelihood method

SYNOPSIS


frestml -data discretestates [-weights properties] -intreefile tree [-njumble integer]
-seed integer [-outgrno integer] [-allsites boolean] -lengths boolean
[-sitelength integer] -global boolean -rough boolean -outfile outfile
[-trout toggle] -outtreefile outfile [-printdata boolean] [-progress boolean]
[-treeprint boolean]

frestml -help

DESCRIPTION


frestml is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Phylogeny:Molecular sequence" command group(s).

OPTIONS


Input section
-data discretestates
File containing one or more sets of restriction data

-weights properties
Weights file

-intreefile tree

Additional section
-njumble integer

-seed integer
Default value: 1

-outgrno integer

-allsites boolean
Default value: Y

-lengths boolean
Default value: N

-sitelength integer
Default value: 6

-global boolean
Default value: N

-rough boolean
Default value: Y

Output section
-outfile outfile

-trout toggle
Default value: Y

-outtreefile outfile

-printdata boolean
Default value: N

-progress boolean
Default value: Y

-treeprint boolean
Default value: Y

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