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CUSHAW3: Accurate Short-read Alignment download for Linux

Free download CUSHAW3: Accurate Short-read Alignment Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named CUSHAW3: Accurate Short-read Alignment whose latest release can be downloaded as cushaw3-v3.0.3.tar.bz2. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named CUSHAW3: Accurate Short-read Alignment with OnWorks for free.

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- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

CUSHAW3: Accurate Short-read Alignment


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DESCRIPTION

CUSHAW3 is an open-source parallelized, sensitive and accurate short-read aligner. This aligner proposes a general approach to properly aligning both easy and hard reads to large genomes such as the human genome. Perform evaluation on alignment quality reals that CUSHAW3 consistently outperforms CUSHAW2, BWA-MEM, Bowtie2 and GEM in terms of single-end and paired-end alignment. Furthermore, our aligner has demonstrated better paired-end alignment performance than Novalign3 for short-reads with high error rates.




User interface

Console/Terminal


Programming Language

C++


Categories

Bio-Informatics

This is an application that can also be fetched from https://sourceforge.net/projects/cushaw3/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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