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PROGRAM:

NAME


bp_extract_feature_seq - extract the corresponding sequence for a specified feature type

SYNOPSIS


bp_extract_feature_seq [--format FORMAT] [--feature CDS] [--output FILE] [--input] FILE

DESCRIPTION


This script will extract the sequence for all the features you specify.

OPTIONS


-i, --input
Specifies the sequence file to be read.

--format
Format of the file specifed by --input. If not given, it will try to guess the correct
format from the file extension.

--feature
Feature to be extracted. By default, it extracts the CDS feature.

-o, --output
File where the extracted features will be saved. If not specified, STDOUT is used.

FEEDBACK


Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send
your comments and suggestions preferably to the Bioperl mailing list. Your participation
is much appreciated.

L<[email protected]> - General discussion
L<http://bioperl.org/wiki/Mailing_lists> - About the mailing lists

Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
resolution. Bug reports can be submitted via email or the web:

L<https://github.com/bioperl/bioperl-live/issues>

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