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dbxedame - Online in the Cloud

Run dbxedame in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command dbxedame that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


dbxedam - Index the EDAM ontology using b+tree indices

SYNOPSIS


dbxedam -dbname string -standardname string -dbresource string -directory directory
-filenames string -fields list -compressed boolean -release string -date string
-exclude string -indexoutdir outdir -outfile outfile

dbxedam -help

DESCRIPTION


dbxedam is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Utils:Database indexing" command group(s).

OPTIONS


Input section
-dbname string
Default value: edam

-standardname string
Default value: $(dbname)

-dbresource string
Default value: edamresource

-directory directory
Default value: .

-filenames string
Default value: EDAM*.obo

Required section
-fields list
Default value: *

-compressed boolean
Default value: Y

Advanced section
-release string
Default value: 0.0

-date string
Default value: 00/00/00

-exclude string

Output section
-indexoutdir outdir
Default value: .

-outfile outfile

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