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dotpathe - Online in the Cloud

Run dotpathe in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command dotpathe that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


dotpath - Draw a non-overlapping wordmatch dotplot of two sequences

SYNOPSIS


dotpath -asequence sequence -bsequence sequence -wordsize integer [-overlaps boolean]
[-boxit boolean] -graph graph

dotpath -help

DESCRIPTION


dotpath is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Alignment:Dot plots" command group(s).

OPTIONS


Input section
-asequence sequence

-bsequence sequence

Required section
-wordsize integer
Default value: 4

Output section
-overlaps boolean
Displays the overlapping matches (in red) as well as the minimal set of
non-overlapping matches Default value: N

-boxit boolean
Default value: Y

-graph graph

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