EnglishFrenchSpanish

Ad


OnWorks favicon

gdcmdump - Online in the Cloud

Run gdcmdump in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command gdcmdump that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


gdcmdump - dumps a DICOM file, it will display the structure and values contained in the
specified DICOM file.

SYNOPSIS


gdcmdump [options] dcm_file
gdcmdump [options] dcm_directory

DESCRIPTION


The gdcmdump command line program dumps a DICOM file to the console. For those familiar
with dcmdump (DCMTK) output, gdcmdump has some minor differences. Namely:

· For Implicit Transfer Syntax gdcmdump will print ?? instead of the dictionary VR

gdcmdump has a limited private dictionary that is used to lookup private element whenever
possible.

PARAMETERS


dcm_file DICOM input filename
dcm_directory DICOM input directory

OPTIONS


specific options
-x --xml-dict generate the XML dict (only private elements for now).
-r --recursive recursive (input is a directory)
-d --dump dump value (limited use).
-p --print print value instead of simply dumping (default).
-c --color print in color.
-C --csa print SIEMENS CSA Header (0029,[12]0,SIEMENS CSA HEADER).
-P --pdb print GEMS Protocol Data Block (0025,1b,GEMS_SERS_01).
--elscint print ELSCINT Protocol Information (01f7,26,ELSCINT1).
--vepro print VEPRO Protocol Information (0055,20,VEPRO VIF 3.0 DATA).
or VEPRO Protocol Information (0055,20,VEPRO VIM 5.0 DATA).
--sds print Philips MR Series Data Storage (1.3.46.670589.11.0.0.12.2) Information (2005,32,Philips MR Imaging DD 002).
-A --asn1 print encapsulated ASN1 structure >(0400,0520).
--map-uid-names map UID to names.

general options
-h --help
print this help text and exit

-v --version
print version information and exit

-V --verbose
verbose mode (warning+error).

-W --warning
warning mode, print warning information

-E --error
error mode, print error information

-D --debug
debug mode, print debug information

special options
-I --ignore-errors dumps even if file is corrupted (advanced users only, see disclaimers).

TYPICAL USAGE


Printing Implicit Transfer Syntax
The VR are not found in the file, thus are presented with a "(??)", and right next to it
(if found) the correct VR.

Eg.:

$ gdcmdump GE_DLX-8-MONO2-PrivateSyntax.dcm

# Dicom-File-Format
\&...
(0008,0000) ?? (UL) 434 # 4,1 Generic Group Length
(0008,0005) ?? (CS) [ISO_IR 100] # 10,1-n Specific Character Set
(0008,0008) ?? (CS) [ORIGINAL\\PRIMARY\\SINGLE PLANE ] # 30,2-n Image Type
(0008,0016) ?? (UI) [1.2.840.10008.5.1.4.1.1.12.1] # 28,1 SOP Class UID
(0008,0018) ?? (UI) [1.2.840.113619.2.16.1.0.906539207.1.24207] # 42,1 SOP Instance UID
(0008,0020) ?? (DA) [19980923] # 8,1 Study Date
(0008,0021) ?? (DA) [19980923] # 8,1 Series Date
(0008,0022) ?? (DA) [19980923] # 8,1 Acquisition Date
(0008,0023) ?? (DA) [19980923] # 8,1 Content Date
(0008,0030) ?? (TM) [101229.000] # 10,1 Study Time
(0008,0031) ?? (TM) [101229.000] # 10,1 Series Time
(0008,0032) ?? (TM) [102653.000] # 10,1 Acquisition Time
(0008,0033) ?? (TM) [102653.000] # 10,1 Content Time
\&...

Print Private Attributes
GDCM has a limited private dictionary. Whenever possible, it will try to lookup the
private data element.

$ gdcmdump 012345.002.050.dcm

\&...
(0009,0010) LO [GEMS_IDEN_01] # 12,1 Private Creator
(0009,1001) LO [GE_GENESIS_FF ] # 14,1 Full fidelity
(0009,1002) SH [MRCV] # 4,1 Suite id
(0009,1004) SH [SIGNA ] # 6,1 Product id
(0009,1027) SL 985968524 # 4,1 Image actual date
(0009,1030) SH [19356UMR2 ] # 10,1 Service id
(0009,1031) SH [999 ] # 4,1 Mobile location number
(0009,10e3) UI [1.2.840.113619.1.1.4.1762386977] # 32,1 Equipment UID
(0009,10e6) SH [08] # 2,1 Genesis Version - now
(0009,10e7) UL 2757786872 # 4,1 Exam Record checksum
(0009,10e9) SL 985968523 # 4,1 Actual series data time stamp
\&...
(0019,0000) UL 1208 # 4,1 Generic Group Length
(0019,0010) LO [GEMS_ACQU_01] # 12,1 Private Creator
(0019,100f) DS [424.399994] # 10,1 Horiz. Frame of ref.
(0019,1011) SS 0 # 2,1 Series contrast
\&...
(0019,10e0) DS [0.000000] # 8,1 User data 24 {# DTI Diffusion Dir., release 10.0 & above}
(0019,10e2) DS [0.000000] # 8,1 Velocity Encode Scale
(0019,10f2) SS 0 # 2,1 Fast phases
(0019,10f9) DS [98] # 2,1 Transmit gain
\&...
(0021,0000) UL 372 # 4,1 Generic Group Length
(0021,0010) LO [GEMS_RELA_01] # 12,1 Private Creator
(0021,1003) SS 0 # 2,1 Series from which Prescribed
\&...

SIEMENS CSA Header
Using this option it is possible to dump as a readable text what is contained in the
private attribute as found in typical SIEMENS MR DICOM file.

Eg.:

$ gdcmdump --csa MR_SIEMENS_forceLoad29-1010_29-1020.dcm

(0029,0010)siemens csa header
Image shadow data (0029,xx10)

0 - 'EchoLinePosition' VM 1, VR IS, SyngoDT 6, NoOfItems 6, Data '64 '
1 - 'EchoColumnPosition' VM 1, VR IS, SyngoDT 6, NoOfItems 6, Data '64 '
2 - 'EchoPartitionPosition' VM 1, VR IS, SyngoDT 6, NoOfItems 6, Data '32 '
3 - 'UsedChannelMask' VM 1, VR UL, SyngoDT 9, NoOfItems 6, Data '255 '
4 - 'Actual3DImaPartNumber' VM 1, VR IS, SyngoDT 6, NoOfItems 0, Data
5 - 'ICE_Dims' VM 1, VR LO, SyngoDT 19, NoOfItems 6, Data 'X_1_1_1_1_1_1_31_1_1_1_1_19'
6 - 'B_value' VM 1, VR IS, SyngoDT 6, NoOfItems 6, Data '0 '
7 - 'Filter1' VM 1, VR IS, SyngoDT 6, NoOfItems 0, Data
8 - 'Filter2' VM 1, VR IS, SyngoDT 6, NoOfItems 0, Data
\&...

GEMS Protocol Data Block
Using this option it is possible to dump as a readable text what is contained in the
private attribute as found in typical GEMS MR DICOM file.

Protocol Data Block : 0025,xx1b,GEMS_SERS_01

$ gdcmdump --pdb GE_MR_0025xx1bProtocolDataBlock.dcm

ENTRY "Head First"
POSITION "Supine"
ANREF "NA"
COIL "HEAD"
PLANE "OBLIQUE"
SEDESCFLAG "1"
SEDESC "AX FSE T2"
IMODE "2D"
PSEQ "FSE-XL"
IOPT "FC, EDR, TRF, Fast"
PLUG "22"
FILTCHOICE "None"
BWRT "-1"
TRICKSIMG "1"
TAG_SPACE "7"
TAG_TYPE "None"
\&...

ELSCINT Protocol Information
Using this option it is possible to dump as a readable text what is contained in the
private attribute as found in typical ELSCINT CT DICOM file.

ELSCINT Protocol Information: (01f7,26,ELSCINT1)

$ gdcmdump --elscint ELSCINT1_ProtocolInformation.dcm

ELSCINT1 Dumping info from tag (01f7,26,elscint1)
ELSCINT1/Item name: []
ApprovedStep [yes]
RefSurview [1\0]
STD-first-img-pos [11.5]
current-step [yes]
ntimed-steps [0]
orig-n-slices [390]
protocol-file [Head_Multi_1032_usr.proc]
protocol-name [FACE-TRAUMA/Head/Hx]
protocol-path [/usr/diamond.root/spr/]
protocol-step [1]
protocol-version [2.51]

ELSCINT1/Item name: [doseright]
ACS [n/a]
ACS-bed-position [0]
ACS-calc-mas [0]
ACS-iq-parameter [0]
ACS-learn-allowed [no]
ACS-water-radius [-1.000000]
ACS-water-radius-scan [-1]
\&...

VEPRO Protocol Information
Using this option it is possible to dump as a readable text what is contained in the
private attribute as found in typical VEPRO CT DICOM file.

ELSCINT Protocol Information: (0055,20,VEPRO VIM 5.0 DATA)

$ gdcmdump --vepro VEPRO_ProtocolInformation.dcm

VIMDATA2: (0055,20,VEPRO VIM 5.0 DATA)
ID: VIM
Version: 5.0
UserName:
UserAdress1: Name of Institution
UserAdress2: Street of Institution
UserAdress3: City of Institution
UserAdress4:
UserAdress5:
RecDate: 20101001
RecTime: 211321
RecPlace:
RecSource: DICOM Distributor
DF1: P-09/10-41808
DF2: Sultana Razia
DF3: 19411001
DF4: F
DF5:
DF6:
DF7:
DF8: CT Scan Brain without Contrast
DF9: 10/10-0034873
DF10: 10/10-00348
DF11:
DF12:
DF13:
DF14: Head 0.5
DF15: 4
DF16:
DF17:
DF18:
DF19:
DF20:
StudyUID: 1.2.392.200036.9116.2.6.1.48.1214228007.1285934880.206831
SeriesUID: 1.2.392.200036.9116.2.6.1.48.1214228007.1285935201.938653
Modality: CT

Philips Private MR Series Data Storage (1.3.46.670589.11.0.0.12.2)
Using this option it is possible to dump as a readable text what is contained in the
private attribute as found in typical Philips Private MR Series Data Storage file.

PMS Series Data Storage (2005,32,Philips MR Imaging DD 002)

$ gdcmdump --sds PMS_SeriesDataStorage.dcm

\&...
PMS/Item name: [PDF_CONTROL_GEN_PARS/IEEE_PDF/Y ]
\&...
PMS/Item name: [PDF_CONTROL_PREP_PARS /IEEE_PDF/Y ]
\&...
PMS/Item name: [PDF_CONTROL_RECON_PARS/IEEE_PDF/Y ]
\&...
PMS/Item name: [PDF_CONTROL_SCAN_PARS /IEEE_PDF/Y ]
\&...
PMS/Item name: [PDF_EXAM_PARS /IEEE_PDF/Y ]
\&...
PMS/Item name: [PDF_HARDWARE_PARS /IEEE_PDF/Y ]
\&...
PMS/Item name: [PDF_PREP_PARS /IEEE_PDF/Y ]
\&...
PMS/Item name: [PDF_SPT_PARS/IEEE_PDF/Y ]
SP_scan_resol [256\256] # 2
SP_pda_profiles [0\0] # 2
SP_filter [324074] # 1
SP_analyse_with_iqt [0] # 1
SP_main_system_type [3] # 1
SP_gradient_system [6] # 1
SP_coil_type [2\2\0\0\0\0\0\0\0\0\0\0\0\0\0\0] # 16
SP_coil_id [2\34\0\0\0\0\0\0\0\0\0\0\0\0\0\0] # 16
SP_coil_part [0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0] # 16
SP_act_q [0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0] # 16
SP_act_coil_freq [0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0] # 16
SP_coil_m_pos [255\255\255\0\0\0\0\0\0\0\0\0\0\0\0\255] # 16
SP_coil_t_pos [255\128\255\0\0\0\0\0\0\0\0\0\0\0\0\255] # 16
SP_surface_coil_con [0\1\0\0\0\0\0\0\0\0\0\0\0\0\0\0] # 16
SP_proton_freq [127801349] # 1
SP_tm_result [2\2\2\2\2\2\2\2\2\2\2\2\2\2\2\2] # 16
SP_f0_result [0] # 1
SP_as_result [0] # 1
SP_po_result [0] # 1
SP_rg_result [0] # 1
SP_dc_result [0] # 1
SP_ph_result [0] # 1
\&...

Encapsulated ASN1 Structure
This option is mainly used for dumping the ASN1 structure of the encrypted Attribute
(0040,0520)

$ gdcmdump encrypted.dcm

\&...
(0400,0500) SQ # u/l,1 Encrypted Attributes Sequence
(fffe,e000) na (Item with undefined length)
(0400,0510) UI [1.2.840.10008.1.2] # 18,1 Encrypted Content Transfer Syntax UID
(0400,0520) OB 30\\82\\03\\ba\\06\\09\\2a\\86\\48\\55\\04\\08\\13 # 958,1 Encrypted Content
(fffe,e00d)
(fffe,e0dd)
\&...

$ gdcmdump --asn1 encrypted.dcm

0:d=0 hl=4 l= 954 cons: SEQUENCE
4:d=1 hl=2 l= 9 prim: OBJECT :pkcs7-envelopedData
15:d=1 hl=4 l= 939 cons: cont [ 0 ]
19:d=2 hl=4 l= 935 cons: SEQUENCE
23:d=3 hl=2 l= 1 prim: INTEGER :00
26:d=3 hl=4 l= 366 cons: SET
30:d=4 hl=4 l= 362 cons: SEQUENCE
34:d=5 hl=2 l= 1 prim: INTEGER :00
37:d=5 hl=2 l= 82 cons: SEQUENCE
39:d=6 hl=2 l= 69 cons: SEQUENCE
41:d=7 hl=2 l= 11 cons: SET
43:d=8 hl=2 l= 9 cons: SEQUENCE
45:d=9 hl=2 l= 3 prim: OBJECT :countryName
50:d=9 hl=2 l= 2 prim: PRINTABLESTRING :AU
54:d=7 hl=2 l= 19 cons: SET
56:d=8 hl=2 l= 17 cons: SEQUENCE
58:d=9 hl=2 l= 3 prim: OBJECT :stateOrProvinceName
63:d=9 hl=2 l= 10 prim: PRINTABLESTRING :Some-State
75:d=7 hl=2 l= 33 cons: SET
77:d=8 hl=2 l= 31 cons: SEQUENCE
79:d=9 hl=2 l= 3 prim: OBJECT :organizationName
84:d=9 hl=2 l= 24 prim: PRINTABLESTRING :Internet Widgits Pty Ltd
110:d=6 hl=2 l= 9 prim: INTEGER :AC966D88787A51B4
121:d=5 hl=2 l= 13 cons: SEQUENCE
123:d=6 hl=2 l= 9 prim: OBJECT :rsaEncryption
134:d=6 hl=2 l= 0 prim: NULL
136:d=5 hl=4 l= 256 prim: OCTET STRING [HEX DUMP]:822368070285AD756C962ECB973514B291F946...
396:d=3 hl=4 l= 558 cons: SEQUENCE
400:d=4 hl=2 l= 9 prim: OBJECT :pkcs7-data
411:d=4 hl=2 l= 29 cons: SEQUENCE
413:d=5 hl=2 l= 9 prim: OBJECT :aes-256-cbc
424:d=5 hl=2 l= 16 prim: OCTET STRING [HEX DUMP]:3B49AFE71749F2BFF1519EBAEA95A393
442:d=4 hl=4 l= 512 prim: cont [ 0 ]

Use gdcmdump online using onworks.net services


Free Servers & Workstations

Download Windows & Linux apps

  • 1
    Asuswrt-Merlin
    Asuswrt-Merlin
    Asuswrt-Merlin is a third party
    firmware for select Asus wireless
    routers. Based on the Asuswrt firmware
    developed by Asus, it brings tweaks, new
    features and ...
    Download Asuswrt-Merlin
  • 2
    Atom
    Atom
    Atom is a text editor that's
    modern, approachable and full-featured.
    It's also easily customizable- you
    can customize it to do anything and be
    able to ...
    Download Atom
  • 3
    Osu!
    Osu!
    Osu! is a simple rhythm game with a well
    thought out learning curve for players
    of all skill levels. One of the great
    aspects of Osu! is that it is
    community-dr...
    Download Osu!
  • 4
    LIBPNG: PNG reference library
    LIBPNG: PNG reference library
    Reference library for supporting the
    Portable Network Graphics (PNG) format.
    Audience: Developers. Programming
    Language: C. This is an application that
    can also...
    Download LIBPNG: PNG reference library
  • 5
    Metal detector based on  RP2040
    Metal detector based on RP2040
    Based on Raspberry Pi Pico board, this
    metal detector is included in pulse
    induction metal detectors category, with
    well known advantages and disadvantages.
    RP...
    Download Metal detector based on RP2040
  • 6
    PAC Manager
    PAC Manager
    PAC is a Perl/GTK replacement for
    SecureCRT/Putty/etc (linux
    ssh/telnet/... gui)... It provides a GUI
    to configure connections: users,
    passwords, EXPECT regula...
    Download PAC Manager
  • More »

Linux commands

Ad