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gt-ltrclustering - Online in the Cloud

Run gt-ltrclustering in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command gt-ltrclustering that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


gt-ltrclustering - Cluster features of LTRs.

SYNOPSIS


gt ltrclustering [option ...] indexname [GFF3_file ...]

DESCRIPTION


-psmall [value]
specify how many percent of the smaller sequence a match needs to cover in order to
cluster the two sequences of the match. (default: 0)

-plarge [value]
specify how many percent of the larger sequence a match needs to cover in order to
cluster the two sequences of the match. (default: 0)

-o [filename]
redirect output to specified file (default: undefined)

-gzip [yes|no]
write gzip compressed output file (default: no)

-bzip2 [yes|no]
write bzip2 compressed output file (default: no)

-force [yes|no]
force writing to output file (default: no)

-help
display help and exit

-version
display version information and exit

REPORTING BUGS


Report bugs to <[email protected]>.

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