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HomSI download for Linux

Free download HomSI Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named HomSI whose latest release can be downloaded as HomSI.zip. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named HomSI with OnWorks for free.

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SCREENSHOTS

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HomSI


DESCRIPTION

In consanguineous families, as a result of inheriting the same genomic segments through both parents, the individuals have stretches of their genomes that are homozygous. This situation leads to the prevalence of recessive diseases among the members of these families. Homozygosity mapping is based on this observation and several recessive disease genes have been discovered with the help of this technique in consanguineous families. The researchers typically use SNP arrays to determine the homozygous regions and then search for the disease gene by sequencing the genes within this candidate disease loci. Recently, the advent of next generation sequencing enables the concurrent identification of homozygous regions and the detection of mutations relevant for diagnosis, using data from a single sequencing experiment. In this respect, we have developed a novel tool that identifies homozygous regions using deep sequence data. Using *.vcf files as an input file, our program identifies the majo



Features

  • Homozygosity Mapping on NGS data

User interface

Java SWT


Programming Language

Java


Categories

Bio-Informatics, Visualization

This is an application that can also be fetched from https://sourceforge.net/projects/homsi/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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