This is the Linux app named scDAPA whose latest release can be downloaded as scDAPA.zip. It can be run online in the free hosting provider OnWorks for workstations.
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scDAPA
DESCRIPTION
scDAPA - a tool for detection and visualization of dynamic alternative polyadenylation from scRNA-seq data
[1] scDAPA user manual
Please visit the Wiki page of this website.
[2] scDAPA Q&A
For Q&A, please visit the Blog page of this website.
[3] scDAPA bug report
You can report a bug as a Ticket request, or start a topic session in the Discussion webpage of this website.
[4] How to cite scDAPA?
Ye C, Zhou Q, Wu X, Yu C, Saban D.R, Li Q.Q (2020) scDAPA: detection and visualization of dynamic alternative polyadenylation from single cell RNA-seq data. Bioinformatics, 36(4): 1262–1264. https://doi.org/10.1093/bioinformatics/btz701
Features
- Bioinformatics
- Alternative Polyadenylation
- scRNA-seq
This is an application that can also be fetched from https://sourceforge.net/projects/scdapa/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
