This is the command mia-2dmyoseries-compdice that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
mia-2dmyoseries-compdice - Evaluate the dice index between segmentations.
SYNOPSIS
mia-2dmyoseries-compdice -1 <first> -2 <second> [options]
DESCRIPTION
mia-2dmyoseries-compdice This program is used to evaluate the per-frame dice index of
segmented regions of two image series
OPTIONS
-1 --first=(input, required); string
first segmentation set
-2 --second=(input, required); string
second segmentation set
-k --skip=2
images to skip atthe begin of the seriesimages to skip atthe begin of the
series
Help & Info
-V --verbose=warning
verbosity of output, print messages of given level and higher priorities.
Supported priorities starting at lowest level are:
info ‐ Low level messages
trace ‐ Function call trace
fail ‐ Report test failures
warning ‐ Warnings
error ‐ Report errors
debug ‐ Debug output
message ‐ Normal messages
fatal ‐ Report only fatal errors
--copyright
print copyright information
-h --help
print this help
-? --usage
print a short help
--version
print the version number and exit
Processing
--threads=-1
Maxiumum number of threads to use for processing,This number should be lower
or equal to the number of logical processor cores in the machine. (-1:
automatic estimation).Maxiumum number of threads to use for processing,This
number should be lower or equal to the number of logical processor cores in
the machine. (-1: automatic estimation).
EXAMPLE
Evaluate the per-frame dice index of the segmentations of set segment.set with respect to
the segmentation set reference.set skipping two images at the beginning.
mia-2dmyoseries-compdice -i segment.set -r reference.set -k 2
AUTHOR(s)
Gert Wollny
COPYRIGHT
This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes
with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU
GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the
option '--copyright'.
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